Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX4O95219 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 AC138969.3-201ENST00000546612 1459 ntBASIC14.41□□□□□ -0.1
SNX4O95219 AC138932.2-201ENST00000548268 1459 ntBASIC14.41□□□□□ -0.1
SNX4O95219 AC126755.4-201ENST00000549796 1459 ntBASIC14.41□□□□□ -0.1
SNX4O95219 AL607033.1-201ENST00000623900 1599 ntBASIC14.41□□□□□ -0.1
SNX4O95219 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SNX4O95219 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SNX4O95219 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX4O95219 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX4O95219 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.4□□□□□ -0.1
SNX4O95219 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 MROH4P-201ENST00000431302 1578 ntBASIC14.4□□□□□ -0.1
SNX4O95219 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX4O95219 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX4O95219 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX4O95219 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 API5-211ENST00000534695 560 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 AC023310.3-201ENST00000557027 670 ntBASIC14.4□□□□□ -0.1
SNX4O95219 AC100756.1-201ENST00000562736 682 ntBASIC14.4□□□□□ -0.1
SNX4O95219 AC138749.3-201ENST00000567691 622 ntBASIC14.4□□□□□ -0.1
SNX4O95219 TP53TG3HP-202ENST00000569755 579 ntBASIC14.4□□□□□ -0.1
SNX4O95219 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX4O95219 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 AC116165.1-201ENST00000611806 668 ntBASIC14.4□□□□□ -0.1
SNX4O95219 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX4O95219 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.4□□□□□ -0.1
SNX4O95219 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX4O95219 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 AF228730.6-201ENST00000641497 218 ntBASIC14.4□□□□□ -0.1
SNX4O95219 AC084121.3-201ENST00000641716 218 ntBASIC14.4□□□□□ -0.1
SNX4O95219 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SNX4O95219 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX4O95219 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX4O95219 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SNX4O95219 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX4O95219 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms