Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-2O95096 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NKX2-2O95096 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-2O95096 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-2O95096 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-2O95096 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 AC026434.2-201ENST00000506094 1078 ntBASIC14.01□□□□□ -0.17
NKX2-2O95096 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-2O95096 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX2-2O95096 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX2-2O95096 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NKX2-2O95096 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-2O95096 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-2O95096 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 PCDHA3-202ENST00000532566 4594 ntBASIC14.01□□□□□ -0.17
NKX2-2O95096 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX2-2O95096 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-2O95096 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX2-2O95096 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX2-2O95096 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 AC232323.1-201ENST00000540724 2099 ntBASIC14□□□□□ -0.17
NKX2-2O95096 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14□□□□□ -0.17
NKX2-2O95096 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NKX2-2O95096 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14□□□□□ -0.17
NKX2-2O95096 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14□□□□□ -0.17
NKX2-2O95096 AC012441.1-201ENST00000446669 685 ntBASIC14□□□□□ -0.17
NKX2-2O95096 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 AC010319.3-201ENST00000597028 470 ntBASIC14□□□□□ -0.17
NKX2-2O95096 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14□□□□□ -0.17
NKX2-2O95096 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NKX2-2O95096 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NKX2-2O95096 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.99□□□□□ -0.17
NKX2-2O95096 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
NKX2-2O95096 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NKX2-2O95096 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms