Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL5O76039 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDKL5O76039 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL5O76039 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.69■□□□□ 0.42
CDKL5O76039 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 AC190387.1-201ENST00000551683 408 ntBASIC17.69■□□□□ 0.42
CDKL5O76039 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 AL603764.1-201ENST00000636452 321 ntBASIC17.69■□□□□ 0.42
CDKL5O76039 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CDKL5O76039 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.69■□□□□ 0.42
CDKL5O76039 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDKL5O76039 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.69■□□□□ 0.42
CDKL5O76039 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDKL5O76039 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 AC007292.2-201ENST00000593524 1812 ntBASIC17.68■□□□□ 0.42
CDKL5O76039 CICP14-201ENST00000629111 2732 ntBASIC17.68■□□□□ 0.42
CDKL5O76039 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
CDKL5O76039 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.68■□□□□ 0.42
CDKL5O76039 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
CDKL5O76039 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CDKL5O76039 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL5O76039 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL5O76039 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CDKL5O76039 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.68■□□□□ 0.42
CDKL5O76039 AP005019.2-201ENST00000615104 511 ntBASIC17.68■□□□□ 0.42
CDKL5O76039 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL5O76039 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 FAM45BP-202ENST00000592932 1624 ntBASIC17.68■□□□□ 0.42
CDKL5O76039 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.68■□□□□ 0.42
CDKL5O76039 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.68■□□□□ 0.42
CDKL5O76039 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDKL5O76039 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 RNU1-114P-201ENST00000365297 166 ntBASIC17.67■□□□□ 0.42
CDKL5O76039 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.67■□□□□ 0.42
CDKL5O76039 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 AC022616.1-201ENST00000518688 554 ntBASIC17.67■□□□□ 0.42
CDKL5O76039 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.67■□□□□ 0.42
CDKL5O76039 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.67■□□□□ 0.42
CDKL5O76039 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDKL5O76039 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.67■□□□□ 0.42
CDKL5O76039 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.67■□□□□ 0.42
CDKL5O76039 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms