Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
ZNF253O75346 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ZNF253O75346 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.95□□□□□ -0.5
ZNF253O75346 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
ZNF253O75346 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.95□□□□□ -0.5
ZNF253O75346 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
ZNF253O75346 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ZNF253O75346 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
ZNF253O75346 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ZNF253O75346 AC099521.3-201ENST00000624251 2938 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 AC005562.1-201ENST00000583030 3219 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF253O75346 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF253O75346 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ZNF253O75346 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.94□□□□□ -0.5
ZNF253O75346 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.94□□□□□ -0.5
ZNF253O75346 ACTG1P14-201ENST00000446382 1122 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 SPDYE11-202ENST00000450699 704 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 IGHV3-62-201ENST00000520057 340 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF253O75346 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.94□□□□□ -0.5
ZNF253O75346 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.94□□□□□ -0.5
ZNF253O75346 SPDYE9P-201ENST00000570642 692 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.94□□□□□ -0.5
ZNF253O75346 AC027601.4-201ENST00000611259 610 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 AC026120.1-201ENST00000611536 926 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 SPDYE10P-202ENST00000612005 668 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 SPDYE8P-202ENST00000612377 668 ntBASIC11.94□□□□□ -0.5
ZNF253O75346 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF253O75346 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ZNF253O75346 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.94□□□□□ -0.5
ZNF253O75346 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZNF253O75346 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.94□□□□□ -0.5
ZNF253O75346 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
ZNF253O75346 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.93□□□□□ -0.5
ZNF253O75346 MIR193BHG-211ENST00000641433 5365 ntBASIC11.93□□□□□ -0.5
ZNF253O75346 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ZNF253O75346 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.93□□□□□ -0.5
ZNF253O75346 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZNF253O75346 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ZNF253O75346 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms