Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.98■□□□□ 0.15
OPHN1O60890 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
OPHN1O60890 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
OPHN1O60890 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.98■□□□□ 0.15
OPHN1O60890 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
OPHN1O60890 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.98■□□□□ 0.15
OPHN1O60890 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
OPHN1O60890 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
OPHN1O60890 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
OPHN1O60890 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
OPHN1O60890 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.97■□□□□ 0.15
OPHN1O60890 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.97■□□□□ 0.15
OPHN1O60890 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.97■□□□□ 0.15
OPHN1O60890 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
OPHN1O60890 AC023310.3-201ENST00000557027 670 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 AC100756.1-201ENST00000562736 682 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 AC138749.3-201ENST00000567691 622 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 CTBP2P3-201ENST00000585629 1255 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.97■□□□□ 0.15
OPHN1O60890 AC116165.1-201ENST00000611806 668 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 ST20-AS1-201ENST00000560255 4223 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 AC091951.1-201ENST00000512854 2465 ntBASIC15.97■□□□□ 0.15
OPHN1O60890 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
OPHN1O60890 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.97■□□□□ 0.15
OPHN1O60890 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.97■□□□□ 0.15
OPHN1O60890 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
OPHN1O60890 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
OPHN1O60890 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
OPHN1O60890 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.96■□□□□ 0.15
OPHN1O60890 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.96■□□□□ 0.15
OPHN1O60890 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.96■□□□□ 0.15
OPHN1O60890 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 BOLA2P3-201ENST00000404566 256 ntBASIC15.96■□□□□ 0.15
OPHN1O60890 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.96■□□□□ 0.15
OPHN1O60890 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.96■□□□□ 0.15
OPHN1O60890 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.96■□□□□ 0.15
OPHN1O60890 RPL13P2-201ENST00000440687 659 ntBASIC15.96■□□□□ 0.15
OPHN1O60890 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.96■□□□□ 0.15
OPHN1O60890 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.96■□□□□ 0.15
OPHN1O60890 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
OPHN1O60890 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.96■□□□□ 0.15
OPHN1O60890 AC092552.1-201ENST00000547243 906 ntBASIC15.96■□□□□ 0.15
OPHN1O60890 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.96■□□□□ 0.15
OPHN1O60890 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.96■□□□□ 0.15
OPHN1O60890 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.96■□□□□ 0.15
OPHN1O60890 MIR4259-201ENST00000584466 101 ntBASIC15.96■□□□□ 0.15
OPHN1O60890 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
OPHN1O60890 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
OPHN1O60890 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms