Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC28A2O43868 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC28A2O43868 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A2O43868 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SLC28A2O43868 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC28A2O43868 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SLC28A2O43868 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.75□□□□□ -0.05
SLC28A2O43868 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SLC28A2O43868 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.75□□□□□ -0.05
SLC28A2O43868 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
SLC28A2O43868 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC28A2O43868 SBF1P1-201ENST00000444527 5631 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC28A2O43868 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 LINC02228-204ENST00000642115 2962 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A2O43868 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.74□□□□□ -0.05
SLC28A2O43868 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 CALR4P-201ENST00000431943 946 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AP001258.2-201ENST00000529891 490 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AC015967.2-201ENST00000624092 234 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 AC006435.4-201ENST00000625037 234 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 AL356737.1-201ENST00000634391 234 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.74□□□□□ -0.05
SLC28A2O43868 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SLC28A2O43868 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC28A2O43868 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A2O43868 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.74□□□□□ -0.05
SLC28A2O43868 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SLC28A2O43868 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SLC28A2O43868 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SLC28A2O43868 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SLC28A2O43868 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A2O43868 KRT8P12-202ENST00000472924 1397 ntBASIC14.73□□□□□ -0.05
SLC28A2O43868 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A2O43868 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A2O43868 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SLC28A2O43868 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A2O43868 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A2O43868 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A2O43868 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC28A2O43868 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.73□□□□□ -0.05
SLC28A2O43868 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A2O43868 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
SLC28A2O43868 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.73□□□□□ -0.05
SLC28A2O43868 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SLC28A2O43868 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms