Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 AL365209.1-201ENST00000624418 6473 ntBASIC15.2■□□□□ 0.02
MID1O15344 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 AC079178.1-201ENST00000420915 656 ntBASIC15.2■□□□□ 0.02
MID1O15344 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.2■□□□□ 0.02
MID1O15344 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.2■□□□□ 0.02
MID1O15344 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 FTLP10-202ENST00000505798 471 ntBASIC15.2■□□□□ 0.02
MID1O15344 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.2■□□□□ 0.02
MID1O15344 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MID1O15344 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MID1O15344 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MID1O15344 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
MID1O15344 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 AL137783.1-201ENST00000623494 1896 ntBASIC15.19■□□□□ 0.02
MID1O15344 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MID1O15344 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
MID1O15344 MIR663B-201ENST00000408361 115 ntBASIC15.19■□□□□ 0.02
MID1O15344 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.19■□□□□ 0.02
MID1O15344 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.19■□□□□ 0.02
MID1O15344 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.19■□□□□ 0.02
MID1O15344 HSPB1P2-201ENST00000448722 546 ntBASIC15.19■□□□□ 0.02
MID1O15344 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.19■□□□□ 0.02
MID1O15344 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.19■□□□□ 0.02
MID1O15344 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 ZACNP1-201ENST00000612259 710 ntBASIC15.19■□□□□ 0.02
MID1O15344 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.19■□□□□ 0.02
MID1O15344 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.19■□□□□ 0.02
MID1O15344 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MID1O15344 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms