Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 CU634019.7-201ENST00000624153 1185 ntBASIC16.14■□□□□ 0.17
CAPN9O14815 FP236241.2-201ENST00000624906 1185 ntBASIC16.14■□□□□ 0.17
CAPN9O14815 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.14■□□□□ 0.17
CAPN9O14815 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN9O14815 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN9O14815 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN9O14815 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CAPN9O14815 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CAPN9O14815 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN9O14815 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CAPN9O14815 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CAPN9O14815 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.14■□□□□ 0.17
CAPN9O14815 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 AC023024.2-201ENST00000623561 1993 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN9O14815 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN9O14815 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN9O14815 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CAPN9O14815 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN9O14815 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN9O14815 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN9O14815 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 GAPDHP40-201ENST00000505218 1006 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN9O14815 ENPP7P5-201ENST00000541031 1031 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 AL596325.1-201ENST00000563991 1082 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 AC124283.3-201ENST00000570869 594 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.13■□□□□ 0.17
CAPN9O14815 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.13■□□□□ 0.17
CAPN9O14815 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CAPN9O14815 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.13■□□□□ 0.17
CAPN9O14815 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CAPN9O14815 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CAPN9O14815 AC023908.3-201ENST00000564211 3047 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CAPN9O14815 KRT8P44-201ENST00000441609 1350 ntBASIC16.13■□□□□ 0.17
CAPN9O14815 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.12■□□□□ 0.17
CAPN9O14815 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN9O14815 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN9O14815 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 AP001582.1-201ENST00000525856 295 ntBASIC16.12■□□□□ 0.17
CAPN9O14815 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN9O14815 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.12■□□□□ 0.17
CAPN9O14815 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.12■□□□□ 0.17
CAPN9O14815 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms