Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 AP000358.1-201ENST00000456260 156 ntBASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 IGHV3-37-201ENST00000518544 340 ntBASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC133540.1-201ENST00000620845 1019 ntBASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC025271.4-201ENST00000621477 1726 ntBASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.02■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC023090.2-201ENST00000625182 2110 ntBASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 MIR557-201ENST00000385239 98 ntBASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL583805.1-201ENST00000391389 531 ntBASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 GCOM2-201ENST00000509133 1104 ntBASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC092850.2-201ENST00000623821 2697 ntBASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 SALL4P5-201ENST00000419001 1760 ntBASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LOC102724428A0A0B4J2F2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 AL035414.1-201ENST00000451327 857 ntBASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 MIR4522-201ENST00000584932 87 ntBASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 SIGLEC18P-201ENST00000602271 909 ntBASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 PCDHB19P-201ENST00000570871 2371 ntBASIC19■□□□□ 0.63
LOC102724428A0A0B4J2F2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms