Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC140912.1-201ENST00000577171 1054 ntBASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AC132938.2-201ENST00000579188 680 ntBASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AC027307.3-201ENST00000594262 1100 ntBASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AL591163.1-201ENST00000641757 987 ntBASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AC138969.3-201ENST00000546612 1459 ntBASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 AC138932.2-201ENST00000548268 1459 ntBASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 AC126755.4-201ENST00000549796 1459 ntBASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
DDX49Q9Y6V7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC041040.2-201ENST00000622926 2899 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 INE1-201ENST00000456273 945 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC023310.3-201ENST00000557027 670 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC100756.1-201ENST00000562736 682 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC138749.3-201ENST00000567691 622 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 MIR4321-201ENST00000592276 80 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC116165.1-201ENST00000611806 668 ntBASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.39■□□□□ 0.53
DDX49Q9Y6V7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 OR8S1-201ENST00000310194 1080 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 SPDYE17-201ENST00000412399 783 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 AC098850.1-201ENST00000419919 790 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 ZNF890P-202ENST00000530367 1156 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 CR383656.12-201ENST00000549567 513 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 AC024267.1-201ENST00000582320 895 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms