Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AC008825.2-201ENST00000603374 718 ntBASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AL805961.1-201ENST00000642026 753 ntBASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AC105250.1-201ENST00000509378 2057 ntBASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AL118508.1-201ENST00000613502 2345 ntBASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AC239868.1-201ENST00000369385 493 ntBASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 POU5F1P2-201ENST00000521750 823 ntBASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 Z98259.2-201ENST00000641583 609 ntBASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 AC136759.1-202ENST00000530858 2194 ntBASIC15.72■□□□□ 0.11
HCFC2Q9Y5Z7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AL138725.1-201ENST00000407347 1314 ntBASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AL391005.1-201ENST00000623953 2435 ntBASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 AC005962.1-201ENST00000584100 773 ntBASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HCFC2Q9Y5Z7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HCFC2Q9Y5Z7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HCFC2Q9Y5Z7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.71■□□□□ 0.1
HCFC2Q9Y5Z7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HCFC2Q9Y5Z7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.71■□□□□ 0.1
HCFC2Q9Y5Z7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms