Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 AC099548.2-209ENST00000480264 625 ntBASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 AC244093.1-201ENST00000610837 814 ntBASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 AC068587.10-201ENST00000641210 219 ntBASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 AC020907.1-201ENST00000616460 1350 ntBASIC15.24■□□□□ 0.03
PCDHB1Q9Y5F3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 AC092933.1-201ENST00000393644 945 ntBASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 AC108725.1-201ENST00000495472 409 ntBASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 AL049840.4-201ENST00000602422 811 ntBASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 DRD5P1-201ENST00000456605 1438 ntBASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 AP000845.1-201ENST00000581677 2131 ntBASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.23■□□□□ 0.03
PCDHB1Q9Y5F3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 REXO1L2P-201ENST00000425429 2069 ntBASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 FAM21FP-201ENST00000426241 1131 ntBASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 AC026410.3-201ENST00000514280 936 ntBASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 RNA5SP412-201ENST00000516234 123 ntBASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHB1Q9Y5F3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms