Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRCH1Q9Y2L9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AC131902.2-201ENST00000566892 2172 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 LAGE3P1-201ENST00000425356 484 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 PRYP5-201ENST00000451909 266 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 RNA5SP419-201ENST00000515908 135 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AC025062.2-201ENST00000605477 670 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AC120114.3-201ENST00000611923 658 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AC148477.8-201ENST00000624298 468 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 FAM215A-202ENST00000632077 792 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AP000845.1-201ENST00000581677 2131 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 AC023794.5-201ENST00000564380 2157 ntBASIC14.56□□□□□ -0.08
LRCH1Q9Y2L9 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 AL022342.1-201ENST00000400363 863 ntBASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 AL590627.1-203ENST00000421194 1026 ntBASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 BX005266.1-201ENST00000473402 457 ntBASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 AC139887.3-201ENST00000568585 713 ntBASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 MIR7706-201ENST00000613747 67 ntBASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 AC107918.4-202ENST00000641623 219 ntBASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.55□□□□□ -0.08
LRCH1Q9Y2L9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms