Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 KRT8P12-202ENST00000472924 1397 ntBASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AC067863.1-201ENST00000494933 530 ntBASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AL079307.3-201ENST00000556114 283 ntBASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 MIR6069-201ENST00000620069 79 ntBASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 Z92544.3-201ENST00000624747 417 ntBASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
HHLA3Q9XRX5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 KRT18P28-201ENST00000453838 1332 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AL139400.1-201ENST00000366220 510 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 EEF1DP4-201ENST00000446006 880 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 FAM86GP-201ENST00000448322 971 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 KLF2P3-201ENST00000451977 1087 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 SERBP1P3-201ENST00000459980 809 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AC125807.1-201ENST00000483097 614 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 BANF1P1-201ENST00000553684 263 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AL133215.2-201ENST00000609242 977 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms