Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 SCARNA21-201ENST00000517026 139 ntBASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AC138696.2-201ENST00000607376 223 ntBASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AC073911.3-201ENST00000624401 631 ntBASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 Z98259.2-201ENST00000641583 609 ntBASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.2■□□□□ 0.5
ZC3H4Q9UPT8 AC244394.1-201ENST00000435000 1665 ntBASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 AC105917.1-201ENST00000506637 2539 ntBASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 AC025262.2-201ENST00000623975 1056 ntBASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZC3H4Q9UPT8 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZC3H4Q9UPT8 ME2P1-201ENST00000426028 1970 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms