Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AC020658.7-201ENST00000624274 2442 ntBASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBQLN2Q9UHD9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 SIGLEC16-201ENST00000599858 1437 ntBASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 MPDU1-223ENST00000582151 728 ntBASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
UBQLN2Q9UHD9 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 AC004241.5-201ENST00000623870 2448 ntBASIC12.96□□□□□ -0.34
UBQLN2Q9UHD9 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC243591.1-201ENST00000452967 1364 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 STRCP1-201ENST00000509801 5328 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 RPS2P28-201ENST00000314255 741 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms