Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 AP005019.2-201ENST00000615104 511 ntBASIC15.22■□□□□ 0.03
SPASTQ9UBP0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SPASTQ9UBP0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 FAM86MP-201ENST00000340703 885 ntBASIC15.21■□□□□ 0.03
SPASTQ9UBP0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AC022494.1-201ENST00000466044 728 ntBASIC15.21■□□□□ 0.03
SPASTQ9UBP0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 RN7SL219P-201ENST00000582872 296 ntBASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 RHOXF1P1-202ENST00000635473 501 ntBASIC15.21■□□□□ 0.03
SPASTQ9UBP0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.21■□□□□ 0.03
SPASTQ9UBP0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPASTQ9UBP0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SPASTQ9UBP0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SPASTQ9UBP0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.21■□□□□ 0.02
SPASTQ9UBP0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SPASTQ9UBP0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 TUBB1P2-201ENST00000422712 1306 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 TUBB1P1-201ENST00000503144 1300 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AC013268.4-201ENST00000637413 2228 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AL138799.1-201ENST00000448213 1675 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 BRWD1P1-201ENST00000401091 371 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 YBX1P6-201ENST00000442962 1002 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AL355994.2-201ENST00000447882 704 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 KRT90P-201ENST00000549264 1064 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 BX539320.1-201ENST00000623759 877 ntBASIC15.2■□□□□ 0.02
SPASTQ9UBP0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SPASTQ9UBP0 SBF1P1-201ENST00000444527 5631 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms