Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KRT18P25-201ENST00000508931 1278 ntBASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 AC023310.1-201ENST00000554836 735 ntBASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 TCAF2P1-201ENST00000291129 2421 ntBASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC6Q9UBN7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 BCYRN1-201ENST00000418539 200 ntBASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 ZNF767P-206ENST00000513792 565 ntBASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 AC091271.1-201ENST00000611877 1162 ntBASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 AC092127.1-201ENST00000567093 3455 ntBASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 AL138709.1-201ENST00000614840 1693 ntBASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 NORAD-201ENST00000565493 5339 ntBASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC6Q9UBN7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC090616.6-203ENST00000579186 1945 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 MIR326-201ENST00000362220 95 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC245100.3-201ENST00000441281 285 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 MIR3615-201ENST00000581999 87 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC103810.3-201ENST00000583567 96 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 AC243960.2-201ENST00000600996 747 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 BX539320.1-201ENST00000623759 877 ntBASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms