Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
KCMF1Q9P0J7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AP001063.1-201ENST00000568332 529 ntBASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 LINC00528-201ENST00000600723 2160 ntBASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 AL157414.3-201ENST00000624276 1954 ntBASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 REXO1L5P-201ENST00000622260 2098 ntBASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
KCMF1Q9P0J7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ACE3P-201ENST00000423435 1973 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AL139094.1-201ENST00000405549 1188 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ACTG1P3-201ENST00000431775 1114 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AC114812.1-204ENST00000449669 728 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AC093433.1-201ENST00000458048 571 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms