Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 DGCR5-201ENST00000399539 862 ntBASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 HLA-K-203ENST00000430151 1046 ntBASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 AP001063.1-201ENST00000568332 529 ntBASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 LINC02228-204ENST00000642115 2962 ntBASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN4Q9NRR5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC097376.2-205ENST00000610159 5334 ntBASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC098614.1-201ENST00000368528 745 ntBASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 WASH4P-201ENST00000564273 1246 ntBASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC009486.1-201ENST00000569860 813 ntBASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 MIR3197-201ENST00000582241 73 ntBASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC005252.2-201ENST00000624630 1141 ntBASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN4Q9NRR5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 KRT8P14-201ENST00000414254 1442 ntBASIC14□□□□□ -0.17
UBQLN4Q9NRR5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 OR2I1P-210ENST00000642037 4691 ntBASIC14□□□□□ -0.17
UBQLN4Q9NRR5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN4Q9NRR5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms