Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD248Q9HCU0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 CICP17-201ENST00000418553 2377 ntBASIC16.11■□□□□ 0.17
CD248Q9HCU0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 RPS2P32-201ENST00000439199 892 ntBASIC16.11■□□□□ 0.17
CD248Q9HCU0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 MIR6805-201ENST00000615055 62 ntBASIC16.11■□□□□ 0.17
CD248Q9HCU0 AL158212.4-201ENST00000624062 1286 ntBASIC16.11■□□□□ 0.17
CD248Q9HCU0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.11■□□□□ 0.17
CD248Q9HCU0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD248Q9HCU0 KRT8P37-201ENST00000451609 1420 ntBASIC16.11■□□□□ 0.17
CD248Q9HCU0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 AC007389.4-201ENST00000454674 793 ntBASIC16.1■□□□□ 0.17
CD248Q9HCU0 RN7SL399P-201ENST00000471648 279 ntBASIC16.1■□□□□ 0.17
CD248Q9HCU0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 AC008735.3-201ENST00000596646 500 ntBASIC16.1■□□□□ 0.17
CD248Q9HCU0 AL033527.5-201ENST00000641382 801 ntBASIC16.1■□□□□ 0.17
CD248Q9HCU0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 LINC01230-201ENST00000625222 3017 ntBASIC16.1■□□□□ 0.17
CD248Q9HCU0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 OR2I1P-210ENST00000642037 4691 ntBASIC16.1■□□□□ 0.17
CD248Q9HCU0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CD248Q9HCU0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CD248Q9HCU0 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.09■□□□□ 0.17
CD248Q9HCU0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 MIR658-201ENST00000385210 100 ntBASIC16.09■□□□□ 0.17
CD248Q9HCU0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms