Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 CHCHD2P3-201ENST00000603038 451 ntBASIC15.7■□□□□ 0.1
USP29Q9HBJ7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP29Q9HBJ7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 HLA-V-201ENST00000429037 534 ntBASIC15.69■□□□□ 0.1
USP29Q9HBJ7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 AC093726.1-201ENST00000608064 963 ntBASIC15.69■□□□□ 0.1
USP29Q9HBJ7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.69■□□□□ 0.1
USP29Q9HBJ7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC093525.8-201ENST00000624099 1342 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 MYCLP2-201ENST00000449268 967 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 RN7SL399P-201ENST00000471648 279 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 FAM86LP-201ENST00000478302 853 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC026410.3-201ENST00000514280 936 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC023310.3-201ENST00000557027 670 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC100756.1-201ENST00000562736 682 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC138749.3-201ENST00000567691 622 ntBASIC15.68■□□□□ 0.1
USP29Q9HBJ7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.68■□□□□ 0.1
USP29Q9HBJ7 AC116165.1-201ENST00000611806 668 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms