Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
SEC22CQ9BRL7 AL136982.4-201ENST00000437689 1740 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AC073621.1-201ENST00000392730 636 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AL513480.1-201ENST00000451731 511 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AC136632.2-201ENST00000512891 861 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 AL355877.3-201ENST00000622820 899 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 KRT8P24-201ENST00000560290 1559 ntBASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.93□□□□□ -0.34
SEC22CQ9BRL7 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SEC22CQ9BRL7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms