Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 AC012645.4-201ENST00000610691 1061 ntBASIC16.68■□□□□ 0.26
DUSP9Q99956 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.68■□□□□ 0.26
DUSP9Q99956 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DUSP9Q99956 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.68■□□□□ 0.26
DUSP9Q99956 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.68■□□□□ 0.26
DUSP9Q99956 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
DUSP9Q99956 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.68■□□□□ 0.26
DUSP9Q99956 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 KRT8P14-201ENST00000414254 1442 ntBASIC16.68■□□□□ 0.26
DUSP9Q99956 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
DUSP9Q99956 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
DUSP9Q99956 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 AC063926.2-201ENST00000623766 1308 ntBASIC16.68■□□□□ 0.26
DUSP9Q99956 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
DUSP9Q99956 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DUSP9Q99956 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.67■□□□□ 0.26
DUSP9Q99956 AC098850.1-201ENST00000419919 790 ntBASIC16.67■□□□□ 0.26
DUSP9Q99956 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.67■□□□□ 0.26
DUSP9Q99956 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.67■□□□□ 0.26
DUSP9Q99956 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.67■□□□□ 0.26
DUSP9Q99956 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.67■□□□□ 0.26
DUSP9Q99956 AC239800.4-201ENST00000603712 296 ntBASIC16.67■□□□□ 0.26
DUSP9Q99956 AC004233.3-201ENST00000607794 1269 ntBASIC16.67■□□□□ 0.26
DUSP9Q99956 AC099568.2-201ENST00000609194 695 ntBASIC16.67■□□□□ 0.26
DUSP9Q99956 AC025048.6-201ENST00000634326 1161 ntBASIC16.67■□□□□ 0.26
DUSP9Q99956 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
DUSP9Q99956 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.67■□□□□ 0.26
DUSP9Q99956 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
DUSP9Q99956 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUSP9Q99956 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.66■□□□□ 0.26
DUSP9Q99956 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.66■□□□□ 0.26
DUSP9Q99956 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
DUSP9Q99956 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.66■□□□□ 0.26
DUSP9Q99956 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.66■□□□□ 0.26
DUSP9Q99956 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 MEP1AP4-201ENST00000423244 1087 ntBASIC16.66■□□□□ 0.26
DUSP9Q99956 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
DUSP9Q99956 DFFBP1-201ENST00000433250 979 ntBASIC16.66■□□□□ 0.26
DUSP9Q99956 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 AC093004.1-201ENST00000508850 424 ntBASIC16.66■□□□□ 0.26
DUSP9Q99956 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.66■□□□□ 0.26
DUSP9Q99956 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.66■□□□□ 0.26
DUSP9Q99956 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 DUX4L47-201ENST00000566374 394 ntBASIC16.66■□□□□ 0.26
DUSP9Q99956 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.66■□□□□ 0.26
DUSP9Q99956 AC124283.3-201ENST00000570869 594 ntBASIC16.66■□□□□ 0.26
DUSP9Q99956 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.66■□□□□ 0.26
DUSP9Q99956 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.66■□□□□ 0.26
DUSP9Q99956 INTS4P2-202ENST00000614726 2019 ntBASIC16.66■□□□□ 0.26
DUSP9Q99956 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.66■□□□□ 0.26
DUSP9Q99956 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
DUSP9Q99956 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUSP9Q99956 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DUSP9Q99956 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms