Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL12A1Q99715 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL12A1Q99715 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL12A1Q99715 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
COL12A1Q99715 FRMPD2B-201ENST00000431305 1347 ntBASIC12.97□□□□□ -0.33
COL12A1Q99715 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL12A1Q99715 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL12A1Q99715 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL12A1Q99715 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL12A1Q99715 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.97□□□□□ -0.33
COL12A1Q99715 CISD2-202ENST00000503643 808 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.97□□□□□ -0.33
COL12A1Q99715 AC006483.2-201ENST00000609813 515 ntBASIC12.97□□□□□ -0.33
COL12A1Q99715 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
COL12A1Q99715 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL12A1Q99715 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 CYP4F23P-201ENST00000593402 1579 ntBASIC12.96□□□□□ -0.33
COL12A1Q99715 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.96□□□□□ -0.33
COL12A1Q99715 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.96□□□□□ -0.33
COL12A1Q99715 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL12A1Q99715 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL12A1Q99715 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL12A1Q99715 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.96□□□□□ -0.33
COL12A1Q99715 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC12.96□□□□□ -0.33
COL12A1Q99715 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL12A1Q99715 RPL3P5-201ENST00000441645 1232 ntBASIC12.96□□□□□ -0.33
COL12A1Q99715 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC12.96□□□□□ -0.33
COL12A1Q99715 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.96□□□□□ -0.33
COL12A1Q99715 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 CYP4F36P-201ENST00000589193 186 ntBASIC12.96□□□□□ -0.33
COL12A1Q99715 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.96□□□□□ -0.33
COL12A1Q99715 AC021321.1-201ENST00000607397 1113 ntBASIC12.96□□□□□ -0.33
COL12A1Q99715 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
COL12A1Q99715 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.96□□□□□ -0.33
COL12A1Q99715 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.96□□□□□ -0.33
COL12A1Q99715 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL12A1Q99715 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
COL12A1Q99715 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 MIR1301-201ENST00000408518 82 ntBASIC12.96□□□□□ -0.34
COL12A1Q99715 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 RPL35P9-201ENST00000446059 350 ntBASIC12.96□□□□□ -0.34
COL12A1Q99715 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC12.96□□□□□ -0.34
COL12A1Q99715 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.96□□□□□ -0.34
COL12A1Q99715 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.96□□□□□ -0.34
COL12A1Q99715 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COL12A1Q99715 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 AC021305.1-201ENST00000520656 1514 ntBASIC12.95□□□□□ -0.34
COL12A1Q99715 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.95□□□□□ -0.34
COL12A1Q99715 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.95□□□□□ -0.34
COL12A1Q99715 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.95□□□□□ -0.34
COL12A1Q99715 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
COL12A1Q99715 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC12.95□□□□□ -0.34
COL12A1Q99715 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC12.95□□□□□ -0.34
COL12A1Q99715 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.95□□□□□ -0.34
COL12A1Q99715 BPIFB5P-201ENST00000457066 1099 ntBASIC12.95□□□□□ -0.34
COL12A1Q99715 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.95□□□□□ -0.34
COL12A1Q99715 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.95□□□□□ -0.34
COL12A1Q99715 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.95□□□□□ -0.34
COL12A1Q99715 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL12A1Q99715 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.95□□□□□ -0.34
COL12A1Q99715 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL12A1Q99715 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms