Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
GFI1Q99684 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.12□□□□□ -0.31
GFI1Q99684 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.12□□□□□ -0.31
GFI1Q99684 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 HTR5BP-201ENST00000430851 1154 ntBASIC13.12□□□□□ -0.31
GFI1Q99684 MKNK2P1-201ENST00000437526 628 ntBASIC13.12□□□□□ -0.31
GFI1Q99684 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.12□□□□□ -0.31
GFI1Q99684 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 TMEM198B-204ENST00000484016 896 ntBASIC13.12□□□□□ -0.31
GFI1Q99684 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.12□□□□□ -0.31
GFI1Q99684 AC026150.2-201ENST00000564693 1156 ntBASIC13.12□□□□□ -0.31
GFI1Q99684 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.12□□□□□ -0.31
GFI1Q99684 BX640515.1-201ENST00000617215 977 ntBASIC13.12□□□□□ -0.31
GFI1Q99684 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.12□□□□□ -0.31
GFI1Q99684 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.12□□□□□ -0.31
GFI1Q99684 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.12□□□□□ -0.31
GFI1Q99684 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.12□□□□□ -0.31
GFI1Q99684 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.12□□□□□ -0.31
GFI1Q99684 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFI1Q99684 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 AC099521.3-201ENST00000624251 2938 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GFI1Q99684 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.11□□□□□ -0.31
GFI1Q99684 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 AL627223.1-201ENST00000416693 442 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 HLA-K-203ENST00000430151 1046 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 RBPMS2P1-201ENST00000437762 623 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.11□□□□□ -0.31
GFI1Q99684 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.11□□□□□ -0.31
GFI1Q99684 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 MIR4453-201ENST00000584019 89 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.11□□□□□ -0.31
GFI1Q99684 PPT1-213ENST00000641319 2388 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GFI1Q99684 KRT8P22-201ENST00000562317 1415 ntBASIC13.11□□□□□ -0.31
GFI1Q99684 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
GFI1Q99684 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFI1Q99684 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFI1Q99684 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFI1Q99684 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms