Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 CICP17-201ENST00000418553 2377 ntBASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 AC015922.1-201ENST00000421102 1152 ntBASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 AC005034.1-201ENST00000426657 489 ntBASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 SPCS2P1-201ENST00000561636 679 ntBASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 AC007787.1-201ENST00000588095 1583 ntBASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 SPDYE12P-201ENST00000618416 771 ntBASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHAMP1Q96JM3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 GK-202ENST00000378941 458 ntTSL 3 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 AC027612.4-201ENST00000605371 583 ntBASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHAMP1Q96JM3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 AL133267.1-201ENST00000398220 340 ntBASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 AC010336.2-201ENST00000564226 506 ntBASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.66■□□□□ 0.42
CHAMP1Q96JM3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms