Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX11Q96FC9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX11Q96FC9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 COX11-210ENST00000639671 696 ntBASIC18.13■□□□□ 0.49
DDX11Q96FC9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AL359258.3-201ENST00000622910 2331 ntBASIC18.13■□□□□ 0.49
DDX11Q96FC9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX11Q96FC9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DDX11Q96FC9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 AL136379.1-201ENST00000623471 2642 ntBASIC18.12■□□□□ 0.49
DDX11Q96FC9 AC126755.1-201ENST00000525846 6405 ntBASIC18.12■□□□□ 0.49
DDX11Q96FC9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 AC104989.1-201ENST00000519711 778 ntBASIC18.12■□□□□ 0.49
DDX11Q96FC9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SLC25A47P1-201ENST00000531577 414 ntBASIC18.12■□□□□ 0.49
DDX11Q96FC9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.12■□□□□ 0.49
DDX11Q96FC9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DDX11Q96FC9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms