Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RFT1Q96AA3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.59□□□□□ -0.23
RFT1Q96AA3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.58□□□□□ -0.23
RFT1Q96AA3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
RFT1Q96AA3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RFT1Q96AA3 ACE3P-201ENST00000423435 1973 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 MIR346-201ENST00000362234 95 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 PHKG1P2-201ENST00000457537 863 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 AC069335.1-201ENST00000489972 472 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 LINC01225-203ENST00000563550 1244 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 AC113367.3-201ENST00000508316 1912 ntBASIC13.58□□□□□ -0.24
RFT1Q96AA3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.58□□□□□ -0.24
RFT1Q96AA3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RFT1Q96AA3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 MTHFR-210ENST00000641407 2387 ntBASIC13.57□□□□□ -0.24
RFT1Q96AA3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms