Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCLNQ969V3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCLNQ969V3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.88□□□□□ -0.03
NCLNQ969V3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.88□□□□□ -0.03
NCLNQ969V3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.88□□□□□ -0.03
NCLNQ969V3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCLNQ969V3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NCLNQ969V3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.87□□□□□ -0.03
NCLNQ969V3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NCLNQ969V3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.87□□□□□ -0.03
NCLNQ969V3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.87□□□□□ -0.03
NCLNQ969V3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 EEF1DP4-201ENST00000446006 880 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NCLNQ969V3 AC044860.1-202ENST00000559481 777 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 AC009407.1-201ENST00000568958 598 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.87□□□□□ -0.03
NCLNQ969V3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 AL450472.2-201ENST00000603663 1156 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 AC008738.7-201ENST00000609744 511 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.87□□□□□ -0.03
NCLNQ969V3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 INTS4P1-203ENST00000641008 3683 ntBASIC14.87□□□□□ -0.03
NCLNQ969V3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
NCLNQ969V3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NCLNQ969V3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.87□□□□□ -0.03
NCLNQ969V3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCLNQ969V3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NCLNQ969V3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NCLNQ969V3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.86□□□□□ -0.03
NCLNQ969V3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.86□□□□□ -0.03
NCLNQ969V3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 AZGP1P1-201ENST00000411909 902 ntBASIC14.86□□□□□ -0.03
NCLNQ969V3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.86□□□□□ -0.03
NCLNQ969V3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.86□□□□□ -0.03
NCLNQ969V3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.86□□□□□ -0.03
NCLNQ969V3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.86□□□□□ -0.03
NCLNQ969V3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.86□□□□□ -0.03
NCLNQ969V3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCLNQ969V3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
NCLNQ969V3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NCLNQ969V3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms