Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 RPL7P3-201ENST00000441388 714 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 FO681548.1-201ENST00000455617 1132 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC026410.3-201ENST00000514280 936 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC005252.2-201ENST00000624630 1141 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC134312.5-201ENST00000568031 1313 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 AC093525.8-201ENST00000624099 1342 ntBASIC16.11■□□□□ 0.17
ATP2A3Q93084 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATP2A3Q93084 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATP2A3Q93084 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AL109954.1-202ENST00000564051 2148 ntBASIC16.1■□□□□ 0.17
ATP2A3Q93084 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC092933.1-201ENST00000393644 945 ntBASIC16.1■□□□□ 0.17
ATP2A3Q93084 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AP000812.2-201ENST00000538934 718 ntBASIC16.1■□□□□ 0.17
ATP2A3Q93084 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AC092127.1-201ENST00000567093 3455 ntBASIC16.1■□□□□ 0.17
ATP2A3Q93084 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.1■□□□□ 0.17
ATP2A3Q93084 TNRC18P2-201ENST00000417666 2714 ntBASIC16.1■□□□□ 0.17
ATP2A3Q93084 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATP2A3Q93084 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATP2A3Q93084 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 AC099336.1-201ENST00000417053 1171 ntBASIC16.09■□□□□ 0.17
ATP2A3Q93084 FAM21FP-201ENST00000426241 1131 ntBASIC16.09■□□□□ 0.17
ATP2A3Q93084 CSF2RBP1-201ENST00000447905 391 ntBASIC16.09■□□□□ 0.17
ATP2A3Q93084 AC007551.1-201ENST00000457394 519 ntBASIC16.09■□□□□ 0.17
ATP2A3Q93084 AC093433.1-201ENST00000458048 571 ntBASIC16.09■□□□□ 0.17
ATP2A3Q93084 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.09■□□□□ 0.17
ATP2A3Q93084 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms