Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S1Q92572 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S1Q92572 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S1Q92572 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 AL136982.4-201ENST00000437689 1740 ntBASIC13.47□□□□□ -0.25
AP3S1Q92572 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S1Q92572 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S1Q92572 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP3S1Q92572 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AP3S1Q92572 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.47□□□□□ -0.25
AP3S1Q92572 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.47□□□□□ -0.25
AP3S1Q92572 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.47□□□□□ -0.25
AP3S1Q92572 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.47□□□□□ -0.25
AP3S1Q92572 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 PRSS29P-201ENST00000440800 595 ntBASIC13.47□□□□□ -0.25
AP3S1Q92572 AC022447.6-201ENST00000515522 438 ntBASIC13.47□□□□□ -0.25
AP3S1Q92572 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S1Q92572 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.47□□□□□ -0.25
AP3S1Q92572 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.47□□□□□ -0.25
AP3S1Q92572 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S1Q92572 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.47□□□□□ -0.25
AP3S1Q92572 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S1Q92572 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
AP3S1Q92572 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S1Q92572 PCDHA5-203ENST00000614258 4248 ntBASIC13.47□□□□□ -0.25
AP3S1Q92572 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 FP325330.2-201ENST00000624219 5630 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 AC015909.5-201ENST00000624336 2266 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 AC005562.1-201ENST00000583030 3219 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
AP3S1Q92572 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 AC016397.2-201ENST00000624848 1985 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.46□□□□□ -0.25
AP3S1Q92572 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 AL139010.1-201ENST00000454878 894 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 OR7E14P-202ENST00000530490 1290 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.46□□□□□ -0.25
AP3S1Q92572 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.46□□□□□ -0.25
AP3S1Q92572 AL356488.2-201ENST00000602755 427 ntBASIC13.46□□□□□ -0.25
AP3S1Q92572 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AP3S1Q92572 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
AP3S1Q92572 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms