Protein–RNA interactions for Protein: Q92546

RGP1, RAB6A-GEF complex partner protein 2, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1Q92546 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.32□□□□□ -0.28
RGP1Q92546 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.32□□□□□ -0.28
RGP1Q92546 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 AL512361.1-201ENST00000554200 418 ntBASIC13.32□□□□□ -0.28
RGP1Q92546 AC005829.1-201ENST00000570002 483 ntBASIC13.32□□□□□ -0.28
RGP1Q92546 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.32□□□□□ -0.28
RGP1Q92546 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RGP1Q92546 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 AC011474.4-201ENST00000623523 2076 ntBASIC13.32□□□□□ -0.28
RGP1Q92546 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.32□□□□□ -0.28
RGP1Q92546 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 PTENP1-202ENST00000532280 3996 ntBASIC13.31□□□□□ -0.28
RGP1Q92546 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RGP1Q92546 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 MIR4469-201ENST00000583919 79 ntBASIC13.31□□□□□ -0.28
RGP1Q92546 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.31□□□□□ -0.28
RGP1Q92546 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.31□□□□□ -0.28
RGP1Q92546 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 MBLAC2-202ENST00000514906 1936 ntBASIC13.31□□□□□ -0.28
RGP1Q92546 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RGP1Q92546 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RGP1Q92546 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RGP1Q92546 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.3□□□□□ -0.28
RGP1Q92546 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.3□□□□□ -0.28
RGP1Q92546 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RGP1Q92546 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.3□□□□□ -0.28
RGP1Q92546 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RGP1Q92546 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RGP1Q92546 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RGP1Q92546 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RGP1Q92546 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RGP1Q92546 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.3□□□□□ -0.28
RGP1Q92546 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RGP1Q92546 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms