Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 RN7SL618P-201ENST00000477850 296 ntBASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC004066.1-201ENST00000502488 802 ntBASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 SDHAP3-202ENST00000515467 728 ntBASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 SPDYE12P-201ENST00000618416 771 ntBASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC44A1Q8WWI5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 AC069262.1-201ENST00000539058 672 ntBASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SLC44A1Q8WWI5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SLC44A1Q8WWI5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 GAPDHP40-201ENST00000505218 1006 ntBASIC15.26■□□□□ 0.03
SLC44A1Q8WWI5 AC022447.6-201ENST00000515522 438 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms