Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC24.06■■□□□ 1.44
CHMP7Q8WUX9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHMP7Q8WUX9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 AC112504.1-201ENST00000623415 1841 ntBASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 SURF4-203ENST00000371991 715 ntTSL 3 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 NME4-203ENST00000397722 1232 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 BRI3P1-201ENST00000440440 378 ntBASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 CSNK1G2P1-201ENST00000442675 955 ntBASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 AC009090.5-201ENST00000624886 2285 ntBASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 CTBP2P8-201ENST00000422584 1330 ntBASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CHMP7Q8WUX9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 ABHD17AP9-201ENST00000561925 548 ntBASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 AC007292.2-201ENST00000593524 1812 ntBASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHMP7Q8WUX9 FTX-216ENST00000638985 1367 ntTSL 5 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 HNRNPA1P27-201ENST00000412087 955 ntBASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 AC010632.2-201ENST00000588369 1224 ntBASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 SALL4P5-201ENST00000419001 1760 ntBASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 REXO1L2P-201ENST00000425429 2069 ntBASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHMP7Q8WUX9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC012508.2-201ENST00000567613 1472 ntBASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC093826.1-201ENST00000508655 993 ntBASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC226150.1-201ENST00000544259 466 ntBASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 MIR5001-201ENST00000580185 100 ntBASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AP005264.6-204ENST00000588436 719 ntBASIC24.02■■□□□ 1.44
CHMP7Q8WUX9 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms