Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 FAM86HP-204ENST00000513466 959 ntBASIC15.21■□□□□ 0.03
CHD5Q8TDI0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CHD5Q8TDI0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CHD5Q8TDI0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.21■□□□□ 0.02
CHD5Q8TDI0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 KRT18P36-201ENST00000411618 1276 ntBASIC15.2■□□□□ 0.02
CHD5Q8TDI0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 YBX1P6-201ENST00000442962 1002 ntBASIC15.2■□□□□ 0.02
CHD5Q8TDI0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 MIR326-201ENST00000362220 95 ntBASIC15.2■□□□□ 0.02
CHD5Q8TDI0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 AC108725.1-201ENST00000495472 409 ntBASIC15.2■□□□□ 0.02
CHD5Q8TDI0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 AC010328.2-201ENST00000597698 1111 ntBASIC15.2■□□□□ 0.02
CHD5Q8TDI0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CHD5Q8TDI0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 DBET-201ENST00000630918 3363 ntBASIC15.19■□□□□ 0.02
CHD5Q8TDI0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 RPL13AP20-201ENST00000459725 609 ntBASIC15.19■□□□□ 0.02
CHD5Q8TDI0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 AL008718.2-201ENST00000609206 1313 ntBASIC15.19■□□□□ 0.02
CHD5Q8TDI0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CHD5Q8TDI0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms