Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC83Q8IWF9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 AC106028.4-201ENST00000614509 607 ntBASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 AC113367.3-201ENST00000508316 1912 ntBASIC17.92■□□□□ 0.46
CCDC83Q8IWF9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 LINC01230-201ENST00000625222 3017 ntBASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 BX640514.1-201ENST00000583223 1918 ntBASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC83Q8IWF9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 DRD5P1-201ENST00000456605 1438 ntBASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC83Q8IWF9 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms