Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 PHBP15-201ENST00000574228 665 ntBASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 THY1-209ENST00000580275 578 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13BQ7Z7G8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 ACTBP7-201ENST00000418351 1124 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AC131206.1-201ENST00000538078 1211 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 TPM1-223ENST00000560445 485 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AC106047.2-201ENST00000511723 743 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AL109837.1-201ENST00000603272 613 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AC006504.5-208ENST00000588784 2401 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AL354861.1-201ENST00000445213 355 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AP000358.1-201ENST00000456260 156 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 FTLP5-201ENST00000586853 534 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 AC006548.2-201ENST00000605217 529 ntBASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13BQ7Z7G8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LINC00554-201ENST00000564841 3011 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 RPL7P35-201ENST00000446943 740 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 POU5F1P2-201ENST00000521750 823 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 GOLGA2P7-209ENST00000560408 745 ntBASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13BQ7Z7G8 AC012073.1-201ENST00000606114 1108 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms