Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAPH1Q70E73 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAPH1Q70E73 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
RAPH1Q70E73 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 Z97205.2-201ENST00000564697 1639 ntBASIC15.39■□□□□ 0.05
RAPH1Q70E73 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 AL133267.1-201ENST00000398220 340 ntBASIC15.39■□□□□ 0.05
RAPH1Q70E73 AL080243.2-201ENST00000418783 582 ntBASIC15.39■□□□□ 0.05
RAPH1Q70E73 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 KRT18P64-201ENST00000434946 1219 ntBASIC15.39■□□□□ 0.05
RAPH1Q70E73 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAPH1Q70E73 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAPH1Q70E73 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.38■□□□□ 0.05
RAPH1Q70E73 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.38■□□□□ 0.05
RAPH1Q70E73 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 AC025048.3-201ENST00000590609 569 ntBASIC15.38■□□□□ 0.05
RAPH1Q70E73 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 AC011467.4-201ENST00000594891 528 ntBASIC15.38■□□□□ 0.05
RAPH1Q70E73 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 AC005702.4-201ENST00000618393 416 ntBASIC15.38■□□□□ 0.05
RAPH1Q70E73 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAPH1Q70E73 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAPH1Q70E73 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms