Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 AC120045.2-201ENST00000567334 178 ntBASIC17.14■□□□□ 0.33
SHC4Q6S5L8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 INTS4P2-202ENST00000614726 2019 ntBASIC17.14■□□□□ 0.33
SHC4Q6S5L8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 SLC7A15P-201ENST00000424028 1363 ntBASIC17.14■□□□□ 0.33
SHC4Q6S5L8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SHC4Q6S5L8 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 AC015802.1-201ENST00000588104 1449 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 AL354702.1-201ENST00000442006 1960 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 AC098850.1-201ENST00000419919 790 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 MEP1AP4-201ENST00000423244 1087 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 SPTLC1P1-201ENST00000447199 261 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 DUX4L47-201ENST00000566374 394 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 AC099568.2-201ENST00000609194 695 ntBASIC17.13■□□□□ 0.33
SHC4Q6S5L8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHC4Q6S5L8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 HSPA7-201ENST00000445535 1927 ntBASIC17.12■□□□□ 0.33
SHC4Q6S5L8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 AL139094.1-201ENST00000405549 1188 ntBASIC17.12■□□□□ 0.33
SHC4Q6S5L8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 PMS2P2-201ENST00000425039 1128 ntBASIC17.12■□□□□ 0.33
SHC4Q6S5L8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 AC124283.3-201ENST00000570869 594 ntBASIC17.12■□□□□ 0.33
SHC4Q6S5L8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms