Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM53Q6P2H8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 CNN2P2-201ENST00000443536 909 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 CNN2P3-201ENST00000450201 906 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 HLA-J-203ENST00000494367 1087 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AL512356.2-201ENST00000546955 174 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AL136317.3-201ENST00000618497 906 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC106818.1-201ENST00000623223 3242 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AC148477.4-201ENST00000613430 1793 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 AL035456.1-201ENST00000456064 1369 ntBASIC14.09□□□□□ -0.15
TMEM53Q6P2H8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.08□□□□□ -0.15
TMEM53Q6P2H8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM53Q6P2H8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM53Q6P2H8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM53Q6P2H8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM53Q6P2H8 AC020658.6-201ENST00000623564 1870 ntBASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TMEM53Q6P2H8 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms