Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 AC002056.1-201ENST00000395613 760 ntBASIC12.19□□□□□ -0.46
FAM78BQ5VT40 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.19□□□□□ -0.46
FAM78BQ5VT40 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 AC092865.6-201ENST00000642101 219 ntBASIC12.19□□□□□ -0.46
FAM78BQ5VT40 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 DGCR9-201ENST00000609630 2415 ntBASIC12.19□□□□□ -0.46
FAM78BQ5VT40 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
FAM78BQ5VT40 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.18□□□□□ -0.46
FAM78BQ5VT40 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 AL139010.1-201ENST00000454878 894 ntBASIC12.18□□□□□ -0.46
FAM78BQ5VT40 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 AC112191.1-201ENST00000523689 701 ntBASIC12.18□□□□□ -0.46
FAM78BQ5VT40 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 AL138918.1-201ENST00000568306 659 ntBASIC12.18□□□□□ -0.46
FAM78BQ5VT40 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM78BQ5VT40 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms