Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 MIR4522-201ENST00000584932 87 ntBASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.8■□□□□ 0.6
RC3H1Q5TC82 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 AC018629.1-201ENST00000623381 1736 ntBASIC18.8■□□□□ 0.6
RC3H1Q5TC82 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
RC3H1Q5TC82 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AC079328.2-201ENST00000561241 3354 ntBASIC18.79■□□□□ 0.6
RC3H1Q5TC82 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 PIN4P1-201ENST00000451079 396 ntBASIC18.79■□□□□ 0.6
RC3H1Q5TC82 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AC114947.1-202ENST00000514136 344 ntBASIC18.79■□□□□ 0.6
RC3H1Q5TC82 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AC025262.2-201ENST00000623975 1056 ntBASIC18.79■□□□□ 0.6
RC3H1Q5TC82 AC092299.1-201ENST00000632679 757 ntBASIC18.79■□□□□ 0.6
RC3H1Q5TC82 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RC3H1Q5TC82 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AP005117.1-202ENST00000581724 1908 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AL807761.2-201ENST00000422849 729 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AC012362.1-201ENST00000434906 739 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AL161773.1-201ENST00000624845 863 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AP001184.1-201ENST00000637936 376 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 TMBIM7P-202ENST00000641474 1516 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 AL139384.1-201ENST00000612143 3047 ntBASIC18.78■□□□□ 0.6
RC3H1Q5TC82 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms