Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 AL157414.3-201ENST00000624276 1954 ntBASIC14.69□□□□□ -0.06
RFTN2Q52LD8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFTN2Q52LD8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 TREML5P-201ENST00000421694 576 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AC092337.1-201ENST00000568699 1129 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AL158211.3-201ENST00000607385 239 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AP001267.2-201ENST00000532619 2086 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 BX640514.1-201ENST00000583223 1918 ntBASIC14.68□□□□□ -0.06
RFTN2Q52LD8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFTN2Q52LD8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 AL360270.3-201ENST00000609118 1348 ntBASIC14.67□□□□□ -0.06
RFTN2Q52LD8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 AC114501.2-201ENST00000439631 535 ntBASIC14.67□□□□□ -0.06
RFTN2Q52LD8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RFTN2Q52LD8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms