Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 MIR3615-201ENST00000581999 87 ntBASIC18.26■□□□□ 0.51
RFX7Q2KHR2 AL008638.5-201ENST00000623814 1298 ntBASIC18.26■□□□□ 0.51
RFX7Q2KHR2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFX7Q2KHR2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 TLE1P1-201ENST00000422965 589 ntBASIC18.25■□□□□ 0.51
RFX7Q2KHR2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 AC091271.1-201ENST00000611877 1162 ntBASIC18.25■□□□□ 0.51
RFX7Q2KHR2 ENPP7P14-201ENST00000621765 1040 ntBASIC18.25■□□□□ 0.51
RFX7Q2KHR2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX7Q2KHR2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AC018735.1-201ENST00000437208 1502 ntBASIC18.24■□□□□ 0.51
RFX7Q2KHR2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 POM121L8P-201ENST00000417732 1281 ntBASIC18.24■□□□□ 0.51
RFX7Q2KHR2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 POM121L9P-203ENST00000441984 1285 ntBASIC18.24■□□□□ 0.51
RFX7Q2KHR2 HSPB1P2-201ENST00000448722 546 ntBASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AP006547.1-201ENST00000563435 692 ntBASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AL096828.3-201ENST00000615354 462 ntBASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX7Q2KHR2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX7Q2KHR2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms