Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.98□□□□□ -0.33
EFNB3Q15768 DUX4L47-201ENST00000566374 394 ntBASIC12.98□□□□□ -0.33
EFNB3Q15768 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.98□□□□□ -0.33
EFNB3Q15768 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.98□□□□□ -0.33
EFNB3Q15768 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.98□□□□□ -0.33
EFNB3Q15768 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB3Q15768 ECM1P1-201ENST00000604092 1279 ntBASIC12.98□□□□□ -0.33
EFNB3Q15768 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
EFNB3Q15768 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
EFNB3Q15768 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.98□□□□□ -0.33
EFNB3Q15768 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
EFNB3Q15768 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
EFNB3Q15768 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB3Q15768 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
EFNB3Q15768 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.98□□□□□ -0.33
EFNB3Q15768 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.97□□□□□ -0.33
EFNB3Q15768 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 AC087481.3-201ENST00000602886 1894 ntBASIC12.97□□□□□ -0.33
EFNB3Q15768 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
EFNB3Q15768 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.97□□□□□ -0.33
EFNB3Q15768 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
EFNB3Q15768 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
EFNB3Q15768 MIR1908-201ENST00000410394 80 ntBASIC12.97□□□□□ -0.33
EFNB3Q15768 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.97□□□□□ -0.33
EFNB3Q15768 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.97□□□□□ -0.33
EFNB3Q15768 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
EFNB3Q15768 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.97□□□□□ -0.33
EFNB3Q15768 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
EFNB3Q15768 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
EFNB3Q15768 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.97□□□□□ -0.33
EFNB3Q15768 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
EFNB3Q15768 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
EFNB3Q15768 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
EFNB3Q15768 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
EFNB3Q15768 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
EFNB3Q15768 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
EFNB3Q15768 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.96□□□□□ -0.33
EFNB3Q15768 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.96□□□□□ -0.33
EFNB3Q15768 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
EFNB3Q15768 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 BRWD1P1-201ENST00000401091 371 ntBASIC12.96□□□□□ -0.33
EFNB3Q15768 MIR1202-201ENST00000408529 83 ntBASIC12.96□□□□□ -0.33
EFNB3Q15768 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.96□□□□□ -0.33
EFNB3Q15768 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
EFNB3Q15768 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms