Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
IRX4P78413 CICP24-201ENST00000605464 2705 ntBASIC15.96■□□□□ 0.14
IRX4P78413 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 AC018892.3-201ENST00000623986 2499 ntBASIC15.95■□□□□ 0.14
IRX4P78413 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 MIR1908-201ENST00000410394 80 ntBASIC15.95■□□□□ 0.14
IRX4P78413 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 KRT43P-201ENST00000434019 910 ntBASIC15.95■□□□□ 0.14
IRX4P78413 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.95■□□□□ 0.14
IRX4P78413 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.95■□□□□ 0.14
IRX4P78413 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 TIMM17BP1-201ENST00000545713 516 ntBASIC15.95■□□□□ 0.14
IRX4P78413 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.95■□□□□ 0.14
IRX4P78413 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.95■□□□□ 0.14
IRX4P78413 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
IRX4P78413 AL365330.1-201ENST00000607459 531 ntBASIC15.95■□□□□ 0.14
IRX4P78413 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 MIR6869-201ENST00000619434 62 ntBASIC15.95■□□□□ 0.14
IRX4P78413 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 KRT8P44-201ENST00000441609 1350 ntBASIC15.95■□□□□ 0.14
IRX4P78413 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.95■□□□□ 0.14
IRX4P78413 TCAF2P1-201ENST00000291129 2421 ntBASIC15.95■□□□□ 0.14
IRX4P78413 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
IRX4P78413 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
IRX4P78413 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IRX4P78413 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
IRX4P78413 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.94■□□□□ 0.14
IRX4P78413 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IRX4P78413 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.94■□□□□ 0.14
IRX4P78413 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
IRX4P78413 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
IRX4P78413 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
IRX4P78413 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms