Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 AC004241.5-201ENST00000623870 2448 ntBASIC13.71□□□□□ -0.21
VBP1P61758 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
VBP1P61758 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.71□□□□□ -0.21
VBP1P61758 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
VBP1P61758 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 AC073621.1-201ENST00000392730 636 ntBASIC13.71□□□□□ -0.21
VBP1P61758 LAGE3P1-201ENST00000425356 484 ntBASIC13.71□□□□□ -0.21
VBP1P61758 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VBP1P61758 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.71□□□□□ -0.21
VBP1P61758 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.71□□□□□ -0.21
VBP1P61758 AC109635.5-201ENST00000533593 962 ntBASIC13.71□□□□□ -0.21
VBP1P61758 AC061975.2-201ENST00000581722 295 ntBASIC13.71□□□□□ -0.21
VBP1P61758 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.71□□□□□ -0.21
VBP1P61758 AL009183.1-201ENST00000603760 355 ntBASIC13.71□□□□□ -0.21
VBP1P61758 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
VBP1P61758 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
VBP1P61758 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.71□□□□□ -0.21
VBP1P61758 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.71□□□□□ -0.21
VBP1P61758 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.71□□□□□ -0.21
VBP1P61758 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VBP1P61758 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
VBP1P61758 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.22
VBP1P61758 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.71□□□□□ -0.22
VBP1P61758 KRT8P37-201ENST00000451609 1420 ntBASIC13.71□□□□□ -0.22
VBP1P61758 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.71□□□□□ -0.22
VBP1P61758 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VBP1P61758 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VBP1P61758 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.71□□□□□ -0.22
VBP1P61758 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VBP1P61758 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.71□□□□□ -0.22
VBP1P61758 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.71□□□□□ -0.22
VBP1P61758 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VBP1P61758 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 DMBT1P1-203ENST00000636837 4628 ntBASIC13.7□□□□□ -0.22
VBP1P61758 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 MRPL20P1-201ENST00000400819 433 ntBASIC13.7□□□□□ -0.22
VBP1P61758 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 AL513480.1-201ENST00000451731 511 ntBASIC13.7□□□□□ -0.22
VBP1P61758 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
VBP1P61758 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.7□□□□□ -0.22
VBP1P61758 MIR3180-1-201ENST00000580374 94 ntBASIC13.7□□□□□ -0.22
VBP1P61758 MIR3180-3-201ENST00000584616 94 ntBASIC13.7□□□□□ -0.22
VBP1P61758 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.7□□□□□ -0.22
VBP1P61758 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 AL355877.3-201ENST00000622820 899 ntBASIC13.7□□□□□ -0.22
VBP1P61758 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.7□□□□□ -0.22
VBP1P61758 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.7□□□□□ -0.22
VBP1P61758 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 AC114271.1-201ENST00000612689 2813 ntBASIC13.7□□□□□ -0.22
VBP1P61758 AC131212.3-201ENST00000624087 4219 ntBASIC13.7□□□□□ -0.22
VBP1P61758 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VBP1P61758 AL607033.1-201ENST00000623900 1599 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms