Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 AC055811.4-201ENST00000624039 1754 ntBASIC13.99□□□□□ -0.17
CDC42P60953 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDC42P60953 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 KRT18P2-201ENST00000447938 1258 ntBASIC13.99□□□□□ -0.17
CDC42P60953 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.99□□□□□ -0.17
CDC42P60953 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.99□□□□□ -0.17
CDC42P60953 KRT8P23-201ENST00000560090 1207 ntBASIC13.99□□□□□ -0.17
CDC42P60953 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CDC42P60953 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.99□□□□□ -0.17
CDC42P60953 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDC42P60953 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.99□□□□□ -0.17
CDC42P60953 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDC42P60953 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.98□□□□□ -0.17
CDC42P60953 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 MBLAC2-202ENST00000514906 1936 ntBASIC13.98□□□□□ -0.17
CDC42P60953 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 AP3S2-216ENST00000617003 1561 ntBASIC13.98□□□□□ -0.17
CDC42P60953 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.98□□□□□ -0.17
CDC42P60953 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 TPT1P11-201ENST00000458482 498 ntBASIC13.98□□□□□ -0.17
CDC42P60953 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.98□□□□□ -0.17
CDC42P60953 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 AC015910.1-201ENST00000579400 975 ntBASIC13.98□□□□□ -0.17
CDC42P60953 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDC42P60953 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDC42P60953 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CDC42P60953 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.98□□□□□ -0.17
CDC42P60953 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDC42P60953 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.97□□□□□ -0.17
CDC42P60953 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms