Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
WNT3P56703 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.4□□□□□ -0.1
WNT3P56703 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.4□□□□□ -0.1
WNT3P56703 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 RN7SL692P-201ENST00000464677 288 ntBASIC14.4□□□□□ -0.1
WNT3P56703 SPDYE22P-201ENST00000582158 798 ntBASIC14.4□□□□□ -0.1
WNT3P56703 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.4□□□□□ -0.1
WNT3P56703 AC025048.6-201ENST00000634326 1161 ntBASIC14.4□□□□□ -0.1
WNT3P56703 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
WNT3P56703 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
WNT3P56703 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.4□□□□□ -0.1
WNT3P56703 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.39□□□□□ -0.11
WNT3P56703 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
WNT3P56703 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
WNT3P56703 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 AC026410.3-201ENST00000514280 936 ntBASIC14.39□□□□□ -0.11
WNT3P56703 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.39□□□□□ -0.11
WNT3P56703 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.39□□□□□ -0.11
WNT3P56703 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 AL158070.2-201ENST00000623713 1621 ntBASIC14.39□□□□□ -0.11
WNT3P56703 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 AC023090.2-201ENST00000625182 2110 ntBASIC14.39□□□□□ -0.11
WNT3P56703 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
WNT3P56703 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.39□□□□□ -0.11
WNT3P56703 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.39□□□□□ -0.11
WNT3P56703 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
WNT3P56703 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
WNT3P56703 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
WNT3P56703 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
WNT3P56703 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
WNT3P56703 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.38□□□□□ -0.11
WNT3P56703 AL137783.1-201ENST00000623494 1896 ntBASIC14.38□□□□□ -0.11
WNT3P56703 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
WNT3P56703 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
WNT3P56703 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
WNT3P56703 SPDYE19P-201ENST00000338590 713 ntBASIC14.38□□□□□ -0.11
WNT3P56703 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
WNT3P56703 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
WNT3P56703 FAM86LP-201ENST00000478302 853 ntBASIC14.38□□□□□ -0.11
WNT3P56703 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.38□□□□□ -0.11
WNT3P56703 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms